((MHC_II_C-sup:H, (MHC_II_C-sup:C, (MHC_II_C-sup:B, MHC_II_C-sup:A))), (MHC_II_C-sup:D, (MHC_II_C-sup:E, (MHC_II_C-sup:G, MHC_II_C-sup:F)))) Core Residues: 71 Core RMSD: 0.488 Raw Score: 132.756 Reference structure: MHC_II_C-sup:A MHC_II_C-sup:A AN--------------VAPEVTVLSRSPVNLGEPN------------------------- 103 MHC_II_C-sup:B --ITN-----------VPPEVTVLTN---------SPVELREPN---------------- 103 MHC_II_C-sup:C -----ATN--------EAPQATVFPK------------------SPVLLGQPN------- 103 MHC_II_C-sup:D --------T-------RPPSVQVAKT---------------------------TPFNTRE 105 MHC_II_C-sup:E ---------R------VEPTVTVYPT---------------------------------- 104 MHC_II_C-sup:F ----------RR----VEPKVTVYPA---------------------------------- 104 MHC_II_C-sup:G ------------RL--EQPSVVISLS---------------------------------- 104 MHC_II_C-sup:H --------------SRGFPIAEVFTL---------------------------------- 105 MHC_II_C-sup:A --------------------------------------ILICFIDKFSPPVVNVTWLRNG 125 MHC_II_C-sup:B --------------------------------------VLICFIDKFTPPVVNVTWLRNG 125 MHC_II_C-sup:C --------------------------------------TLICFVDNIFPPVINITWLRNS 125 MHC_II_C-sup:D PV------------------------------------MLACYVWGFYPAEVTITWRKNG 129 MHC_II_C-sup:E --KTQPLEHHN---------------------------LLVCSVSDFYPGNIEVRWFRNG 135 MHC_II_C-sup:F -----------RTQTLQHHN------------------LLVCSVNGFYPGSIEVRWFRNS 135 MHC_II_C-sup:G --------------------RTEALNHHN---------TLVCSVTDFYPAKIKVRWFRNG 135 MHC_II_C-sup:H -----------------------------KPLEFGKPNTLVCFVSNLFPPMLTVNWHDHS 136 MHC_II_C-sup:A RPVTEGVSE------------------------------------------TVFLPRDD- 142 MHC_II_C-sup:B KPV------TTGVSE------------------------------------TVFLP---R 140 MHC_II_C-sup:C KSV------------TDGVYE------------------------------TSFFV---- 139 MHC_II_C-sup:D KLV------------------MHSSAH------------------------KTAQP---- 143 MHC_II_C-sup:E KEE------------------------KTGIVS------------------TGLVR---- 149 MHC_II_C-sup:F QEE------------------------------KAGVVS------------TGLIQ---- 149 MHC_II_C-sup:G QEE------------------------------------TVGVSS------TQLIR---- 149 MHC_II_C-sup:H VPV------------------------------------------EGFGPTFVSAV---- 150 MHC_II_C-sup:A -------------------HLFRKFHYLTFLPSTDDFYDCEVDHWGL------------- 170 MHC_II_C-sup:B ED-----------------HLFRKFHYLPFLPSTEDVYDCRVEH---WGL---------- 170 MHC_II_C-sup:C --NRD--------------YSFHKLSYLTFIPSDDDIYDCKVEH------WGL------- 170 MHC_II_C-sup:D -----NGD-----------WTYQTLSHLALTPSYGDTYTCVVEH---------IGA---- 174 MHC_II_C-sup:E --------NGD--------WTFQTLVMLETVPQSGEVYTCQVEH------------PSL- 180 MHC_II_C-sup:F -----------NGD-----WTFQTLVMLETVPRSGEVYTCQVEH---------------P 178 MHC_II_C-sup:G --------------NGD--WTFQVLVMLEMTPRRGEVYTCHVEH---------------- 177 MHC_II_C-sup:H -----------------DGLSFQAFSYLNFTPEPSDIFSCIVTH---------------- 177 MHC_II_C-sup:A --------EEPLRKHWEFEE----------------------------------- 182 MHC_II_C-sup:B --------DEPLLK------HWEFD------------------------------ 181 MHC_II_C-sup:C --------EEPVLK-----------HWEPE------------------------- 181 MHC_II_C-sup:D --------PEPILR----------------DWTPG-------------------- 185 MHC_II_C-sup:E --------TDPVTV---------------------EW------------------ 188 MHC_II_C-sup:F SV------TSPLTV-----------------------EWRA-------------- 190 MHC_II_C-sup:G --PSL---TSPITV---------------------------EWRA---------- 190 MHC_II_C-sup:H -----EPDRYTAIA-------------------------------YWVPRNALPS 196