((MHC_II_C-sup:H, (MHC_II_C-sup:C, (MHC_II_C-sup:B, MHC_II_C-sup:A))), (MHC_II_C-sup:D, (MHC_II_C-sup:E, (MHC_II_C-sup:G, MHC_II_C-sup:F)))) Core Residues: 90 Core RMSD: 1.831 Raw Score: 132.756 Reference structure: MHC_II_C-sup:A MHC_II_C-sup:A A-------NVAPEVTVLSR-SPVNL--------------------GEPNILICFIDKFSP 114 MHC_II_C-sup:B -IT-----NVPPEVTVLTN-SP---VEL-----------------REPNVLICFIDKFTP 114 MHC_II_C-sup:C ---AT---NEAPQATVFPK-SP------VLL--------------GQPNTLICFVDNIFP 114 MHC_II_C-sup:D --------TRPPSVQVAKT-TP---------FNT-----------REPVMLACYVWGFYP 118 MHC_II_C-sup:E --------RVEPTVTVYPT-KT------------QPL--------EHHNLLVCSVSDFYP 124 MHC_II_C-sup:F -----R--RVEPKVTVYPARTQ---------------TL------QHHNLLVCSVNGFYP 124 MHC_II_C-sup:G ------R-LEQPSVVISLS-RT-----------------EAL---NHHNTLVCSVTDFYP 124 MHC_II_C-sup:H -------SRGFPIAEVFTL-KP--------------------LEFGKPNTLVCFVSNLFP 125 MHC_II_C-sup:A PVVNVTWLRNGRPVT------EGVSE-TVFLPR------DDHLFRKFHYLTFLPSTDDFY 161 MHC_II_C-sup:B PVVNVTWLRNGKPV-T-----TGVSE-TVFLP-R-----EDHLFRKFHYLPFLPSTEDVY 161 MHC_II_C-sup:C PVINITWLRNSKSV--T----DGVYE-TSFFV--N----RDYSFHKLSYLTFIPSDDDIY 161 MHC_II_C-sup:D AEVTITWRKNGKLV-------MHSSAHKTAQP---N---GDWTYQTLSHLALTPSYGDTY 165 MHC_II_C-sup:E GNIEVRWFRNGKEE---K---TGIVS-TGLVR----N--GDWTFQTLVMLETVPQSGEVY 171 MHC_II_C-sup:F GSIEVRWFRNSQEE----K--AGVVS-TGLIQ-----N-GDWTFQTLVMLETVPRSGEVY 171 MHC_II_C-sup:G AKIKVRWFRNGQEE-----T-VGVSS-TQLIR------NGDWTFQVLVMLEMTPRRGEVY 171 MHC_II_C-sup:H PMLTVNWHDHSVPV------EGFGPT-FVSAV-------DGLSFQAFSYLNFTPEPSDIF 171 MHC_II_C-sup:A DCEVDHWGLEEPLRKHWEFEE--------------------- 182 MHC_II_C-sup:B DCRVEHWGLDEPLLKHW----EFD------------------ 181 MHC_II_C-sup:C DCKVEHWGLEEPVLKHW-------EPE--------------- 181 MHC_II_C-sup:D TCVVEHIGAPEPILRDW----------TPG------------ 185 MHC_II_C-sup:E TCQVEHPSLTDPVTVEW------------------------- 188 MHC_II_C-sup:F TCQVEHPSVTSPLTVEW-------------RA---------- 190 MHC_II_C-sup:G TCHVEHPSLTSPITVEW---------------RA-------- 190 MHC_II_C-sup:H SCIVTHEPDRYTAIAYW-----------------VPRNALPS 196